Digestive Enzymes 101: What They Do, Why You Need Them, and How to Choose the Best Formula

Nutrition

A science-backed breakdown of what digestive enzymes actually do, why so many people today are enzyme-deficient, and how targeted enzyme support can improve bloating, nutrient absorption, protein digestion, gut health, and overall digestive comfort — plus how to choose a high-quality formula that truly works.

This article contains affiliate links, meaning we may earn a small commission if you choose to purchase through them — at no extra cost to you. We only share products we personally use and trust.

Digestive issues are one of the most universal human experiences — bloating after meals, feeling “too full” from normal portions, reflux that seems to come out of nowhere, or the classic “I look 6 months pregnant after dinner” belly.

For years, I thought these symptoms were just part of life. But the deeper I dug into the research (and the more I optimized my own nutrition), the clearer the picture became:

Most people are struggling with low digestive enzyme output — especially lipase, amylase, and proteases — and they don’t even know it.

And when your enzyme levels drop, everything downstream struggles: nutrient absorption, blood sugar balance, gut motility, inflammation, and even your mood.

Today’s article breaks down exactly why enzymes matter so much, how modern life depletes them, what the science says, and how to choose a formula that actually works.

Why Digestive Enzymes Matter More Than You Think

Digestive enzymes are specialized proteins that break your food down into absorbable nutrients.

Without enzymes, eating would be pointless — we’d swallow food, but nothing meaningful would make it into our bloodstream.

Different enzymes have different jobs:

  • Proteases → break down protein into amino acids

  • Lipase → breaks down fats

  • Amylase → breaks down carbohydrates and starch

  • Lactase, maltase, sucrase, etc. → handle specific sugars

  • Cellulase → helps break down plant fibers

  • Peptidase & DPP-IV → help break down hard-to-digest peptides like gluten or casein

The pancreas produces most enzymes, but your stomach, salivary glands, and small intestine contribute too.

When enzymes are low, food doesn’t break down properly. That undigested food sits in the gut, ferments, feeds the wrong bacteria, slows motility, and triggers inflammation.

And that’s when symptoms start showing up.

Signs You Might Have Low Digestive Enzymes

Many people have no idea their discomfort is enzyme-related. The signs can be subtle:

  • Feeling full after small meals

  • Bloating 30–90 minutes after eating

  • Floating stools (fat malabsorption)

  • Gas with strong odor

  • Undigested food in stools

  • Reflux or “pressure” under the ribs

  • Fatigue after meals

  • Constipation or alternating constipation/loose stools

Research shows that enzyme output naturally declines with age (especially after 30–40) and drops significantly under chronic stress conditions.

But even young, healthy people are at risk — because modern eating habits work against our natural enzyme production.

Enjoying This Content?

Get more simple, evidence-backed tips on real food, low-tox living, and raising a healthy family — delivered straight to your inbox.

Why Most People Today Are Enzyme-Deficient

There are several big reasons WHY enzyme levels tank, even if you eat clean:

1. Stress shuts down digestive enzyme secretion

Chronic sympathetic nervous system activity (fight-or-flight) inhibits pancreatic enzyme release.

However, most people eat every meal in a state of stress — driving, rushing, scrolling, and multitasking.

2. The standard American diet overwhelms the system

Ultra-processed foods contain enzyme inhibitors and lack the raw, living enzymes found in whole foods.

3. Low-stomach-acid issues

Hydrochloric acid (HCl) is the “on switch” for digestive enzyme release.

Low HCl → poor enzyme activation → poor protein and fat digestion.

Research confirms HCl declines with age and stress.

4. Less raw food in modern diets

Raw fruits, vegetables, raw dairy, cultured/fermented foods, and sprouted grains carry naturally occurring enzymes.

Cooking destroys those enzymes — not a bad thing, but it means your body must work harder.

5. Gut inflammation and dysbiosis

Inflammation in the GI tract damages the brush border — where many enzymes live. All of this adds up to a very simple reality:

Most people are operating with suboptimal digestive enzyme levels every day.

The Science-Backed Benefits of Digestive Enzymes

When you restore enzyme levels, digestion becomes dramatically more efficient.

Here’s what the research shows:

1. Reduced bloating and gas

Supplemental enzymes significantly reduce bloating, abdominal distension, and post-meal pressure.

2. Better protein absorption and muscle recovery

Proteases improve amino acid uptake and help the body break down tough proteins like steak, chicken, and whey.
Some studies show improved muscle recovery and reduced soreness when proteases are taken around workouts.

3. Improved fat digestion

Lipase-dominant formulas help digest dairy fats, animal fats, and oils — reducing floating stools and post-meal fullness.

4. Better carb and fiber tolerance

Enzymes like amylase, cellulase, and alpha-galactosidase help break down fermentable fibers that normally cause gas.

5. Support for gut inflammation

Some proteases have been shown to reduce intestinal inflammation and support healing of the gut lining.

6. Relief for people with enzyme-related intolerances

  • Lactase for lactose intolerance

  • DPP-IV enzymes for gluten fragments

  • Lipase for bile insufficiency

  • Proteases for people with low stomach acid

7. Better nutrient absorption overall

If food is better broken down, more nutrients reach your bloodstream — minerals, fat-soluble vitamins, amino acids, and essential fatty acids.

Many people notice:

  • More energy

  • Less bloating

  • Clearer skin

  • Better stools

  • Reduced heartburn

  • Less after-meal fatigue

Digestion is foundational — fix digestion, and everything downstream improves.

How to Choose a High-Quality Digestive Enzyme Supplement

Not all enzyme supplements are created equal.

Here’s what actually matters:

1. Look for a high protease count (VERY important)

Protein digestion is where most people struggle. Enzymes should list multiple protease types, not just one.

2. Include lipase for fat digestion

Most cheap formulas underdose lipase — one of the enzymes people need most.

3. Broad-spectrum carbohydrates + fiber enzymes

Amylase, glucoamylase, lactase, cellulase, hemicellulase, invertase, alpha-galactosidase — these expand your ability to break down a wide range of foods.

4. Stability in stomach acid

The formula should be able to survive the acidic stomach environment and activate in the small intestine.

5. No fillers, gums, or binders

Low-grade products cut corners by using cheap fillers, low-activity enzymes, or proprietary blends without transparency.

6. Clinically meaningful enzyme activity numbers (not mg)

The label should show activity units like HUT, LU, DG, or FCC — this is how you know the enzymes are potent.

My Personal Experience With Enzymes

When I first started using digestive enzymes consistently, I could feel the difference immediately:

  • Less post-meal heaviness

  • Better tolerance to high-protein meals

  • Less bloating in the evenings

  • More stable energy after eating

  • Better bathroom regularity

  • And honestly… just feeling lighter

Optimizing digestion has ripple effects — from absorption to hormones to immunity.

My Go-To Digestive Enzyme: MassZymes by BiOptimizers

After testing a lot of different formulas over the years, MassZymes is the one I keep coming back to — and the one I use personally. If I accidentally (or intentionally) consume gluten when eating out, I legitimately don’t feel the negative effects nearly as much when I take three capsules of MassZymes.

Here’s why:

1. Extremely high protease content

MassZymes contains multiple forms of proteases at high activity levels — ideal for protein-heavy diets or anyone with low stomach acid.

2. Broad-spectrum enzyme blend

Covers proteins, fats, carbs, fibers, dairy sugars, and difficult-to-digest peptides.

3. Active in a wide pH range

It works in both low-acid and higher-acid environments, meaning it’s reliably effective.

4. Noticeable difference in post-meal comfort

I feel lighter after meals, especially protein-rich ones like steak or eggs — and the research supports these effects.

5. No junk fillers

Clean formulation, no gums, dyes, or unnecessary additives.

If someone is struggling with bloating, fullness, sluggish digestion, or protein tolerance, this is almost always my first recommendation.

You can always save 15% off MassZymes when you use my code ‘CRAIG’ at checkout! Grab yours here

Final Thoughts

Digestive enzymes aren’t a fad — they’re foundational biology. When enzymes are low, digestion becomes slow, uncomfortable, and nutrient-poor. When enzymes are restored, everything works better.

Think of enzymes like the spark that allows your food to become fuel.

If your goal is:

  • better digestion

  • less bloating

  • improved nutrient absorption

  • better tolerance to protein and fiber

  • or just feeling lighter after meals

…digestive enzymes may be one of the easiest and most effective tools you can add to your daily routine.

 
Craig McCloskey

ABOUT THE AUTHOR

Hi, I'm Craig McCloskey.

I’m a board-certified nutritionist (BSc Nutrition & Dietetics), educator, and researcher who has spent the last decade helping families cut through the noise and understand what truly supports human health. Before becoming a full-time educator and creator, I served as the Head of Education at Ancestral Supplements and as the lead nutritionist for The Model Health Show — one of the world’s top health podcasts.

My work today blends nutrition science, metabolic health, fertility nutrition, non-toxic living, and practical real-food education to help families make confident, evidence-informed decisions without overwhelm. If you care about research-backed guidance that still feels simple and doable — you’re in the right place.

All Articles
The Healthy Home eBook

EBOOK

The Healthy Home Guide

A beginner-friendly guide to creating a safe, non-toxic home for your family. Simple upgrades, room-by-room fixes, and practical swaps that make the biggest impact — without overwhelming your budget or lifestyle.

Download Now

Room-by-room detox

Simple swaps that matter

Budget-friendly upgrades

Family-safe cleaning, air & water tips

Premium Pick

DIGESTIVE ENZYME SUPPORT

Why We Use MassZymes

  • High-protease formula: Breaks down protein efficiently for better absorption
  • Broad-spectrum blend: Supports digestion of fats, carbs, fibers, and peptides
  • Bloating relief: Helps reduce post-meal pressure, fullness, and discomfort
  • Nutrient absorption: Enhances uptake of amino acids and essential nutrients
Code CRAIG saves 15%
Shop MassZymes
Premium Pick

HOSPITAL-GRADE AIR FILTRATION

Why We Use JASPR

  • Filtration: True HEPA + Activated Carbon
  • Coverage: Cleans up to 1,600 sq ft
  • Tech: Real-time air quality sensors
  • Build: Metal housing, zero off-gassing
Code CRAIG saves $300
Shop JASPR
Previous
Previous

Coffee 101: Benefits, Downsides, Best Brewing Methods, and Who Should Be Careful

Next
Next

What Form of Magnesium Do You Actually Need? The Real Differences Explained Simply